biosppy.signals.abp

biosppy.signals.abp

This module provides methods to process Arterial Blood Pressure (ABP) signals.

copyright:

  1. 2015-2026 by Instituto de Telecomunicacoes

license:

BSD 3-clause, see LICENSE for more details.

Functions

abp([signal, sampling_rate, show])

Process a raw ABP signal and extract relevant signal features using default parameters.

find_onsets_zong2003([signal, ...])

Determine onsets of ABP pulses.
biosppy.signals.abp.abp(signal=None, sampling_rate=1000.0, show=True)[source]

Process a raw ABP signal and extract relevant signal features using default parameters.

Parameters:

  • signal (array) – Raw ABP signal.

  • sampling_rate (int, float, optional) – Sampling frequency (Hz).

  • show (bool, optional) – If True, show a summary plot.

Returns:

  • ts (array) – Signal time axis reference (seconds).

  • filtered (array) – Filtered ABP signal.

  • onsets (array) – Indices of ABP pulse onsets.

  • heart_rate_ts (array) – Heart rate time axis reference (seconds).

  • heart_rate (array) – Instantaneous heart rate (bpm).

biosppy.signals.abp.find_onsets_zong2003(signal=None, sampling_rate=1000.0, sm_size=None, size=None, alpha=2.0, wrange=None, d1_th=0, d2_th=None)[source]

Determine onsets of ABP pulses. Skips corrupted signal parts. Based on the approach by Zong et al. [Zong03].

Parameters:

  • signal (array) – Input filtered ABP signal.

  • sampling_rate (int, float, optional) – Sampling frequency (Hz).

  • sm_size (int, optional) – Size of smoother kernel (seconds). Defaults to 0.25

  • size (int, optional) – Window to search for maxima (seconds). Defaults to 5

  • alpha (float, optional) – Normalization parameter. Defaults to 2.0

  • wrange (int, optional) – The window in which to search for a peak (seconds). Defaults to 0.1

  • d1_th (int, optional) – Smallest allowed difference between maxima and minima. Defaults to 0

  • d2_th (int, optional) – Smallest allowed time between maxima and minima (seconds), Defaults to 0.15

Returns:

onsets (array) – Indices of ABP pulse onsets.

References

[Zong03]

W Zong, T Heldt, GB Moody and RG Mark, “An Open-source Algorithm to Detect Onset of Arterial Blood Pressure Pulses”, IEEE Comp. in Cardiology, vol. 30, pp. 259-262, 2003